Vector Generalized Linear and Additive Models

Documentation for package ‘VGAM’ version 0.9-1

DESCRIPTION file.
User guides, package vignettes and other documentation.
Code demos. Use demo() to run them.
Package NEWS.

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A B C D E F G H I K L M N O P Q R S T U V W Y Z misc

VGAM-package

Vector Generalized Linear and Additive Models

-- A --

AA.Aa.aa	The AA-Aa-aa Blood Group System
AB.Ab.aB.ab	The AB-Ab-aB-ab Blood Group System
AB.Ab.aB.ab2	The AB-Ab-aB-ab2 Blood Group System
ABO	The ABO Blood Group System
acat	Ordinal Regression with Adjacent Categories Probabilities
AICqrrvglm	Akaike's Information Criterion
AICrrvglm	Akaike's Information Criterion
AICvgam	Akaike's Information Criterion
AICvlm	Akaike's Information Criterion
alaplace1	Asymmetric Laplace Distribution Family Functions
alaplace2	Asymmetric Laplace Distribution Family Functions
alaplace3	Asymmetric Laplace Distribution Family Functions
alclevels	Crashes on New Zealand Roads in 2009
alcoff	Crashes on New Zealand Roads in 2009
Amh	Ali-Mikhail-Haq Distribution's Bivariate Distribution
amh	Ali-Mikhail-Haq Distribution Distribution Family Function
amlbinomial	Binomial Logistic Regression by Asymmetric Maximum Likelihood Estimation
amlexponential	Exponential Regression by Asymmetric Maximum Likelihood Estimation
amlnormal	Asymmetric Least Squares Quantile Regression
amlpoisson	Poisson Regression by Asymmetric Maximum Likelihood Estimation
as.character.SurvS4	Create a Survival Object
as.data.frame.SurvS4	Create a Survival Object
auuc	Auckland University Undergraduate Counts Data

-- B --

backPain	Data on Back Pain Prognosis, from Anderson (1984)
Benford	Benford's Distribution
Benini	The Benini Distribution
benini	Benini Distribution Family Function
beta.ab	The Two-parameter Beta Distribution Family Function
Betabinom	The Beta-Binomial Distribution
betabinomial	Beta-binomial Distribution Family Function
betabinomial.ab	Beta-binomial Distribution Family Function
betaff	The Two-parameter Beta Distribution Family Function
Betageom	The Beta-Geometric Distribution
betageometric	Beta-geometric Distribution Family Function
betaII	Beta Distribution of the Second Kind
Betanorm	The Beta-Normal Distribution
betaprime	The Beta-Prime Distribution
bilogis4	Bivariate Logistic Distribution
bilogistic4	Bivariate Logistic Distribution Family Function
Binom2.or	Bivariate Binary Regression with an Odds Ratio
binom2.or	Bivariate Binary Regression with an Odds Ratio (Family Function)
Binom2.rho	Bivariate Probit Model
binom2.Rho	Bivariate Probit Model (Family Function)
binom2.rho	Bivariate Probit Model (Family Function)
binomialff	Binomial Family Function
binormal	Bivariate normal distribution family function
biplot-method	Biplot of Constrained Regression Models
biplot.rrvglm	Latent Variable Plot for RR-VGLMs
Bisa	The Birnbaum-Saunders Distribution
bisa	Birnbaum-Saunders Distribution Family Function
bivgamma.mckay	Bivariate Gamma: McKay's Distribution
bmi.nz	Body Mass Index of New Zealand Adults Data
borel.tanner	Borel-Tanner Distribution Family Function
Bort	The Borel-Tanner Distribution
Brat	Inputting Data to fit a Bradley Terry Model
brat	Bradley Terry Model
bratt	Bradley Terry Model With Ties

-- C --

calibrate	Model Calibrations
calibrate-method	Calibration for Constrained Regression Models
calibrate.qrrvglm	Calibration for CQO, UQO and CAO models
calibrate.qrrvglm.control	Control function for CQO/UQO/CAO calibration
cao	Fitting Constrained Additive Ordination (CAO)
cao.control	Control Function for RR-VGAMs (CAO)
Card	Cardioid Distribution
cardioid	Cardioid Distribution Family Function
cauchit	Cauchit Link Function
cauchy	Cauchy Distribution Family Function
cauchy1	Cauchy Distribution Family Function
ccoef	Extract Model Constrained/Canonical Coefficients
ccoef-method	Constrained (Canonical) Coefficients
cdf.lmscreg	Cumulative Distribution Function for LMS Quantile Regression
cennormal1	Censored Normal Distribution
cenpoisson	Censored Poisson Family Function
cenrayleigh	Rayleigh Distribution Family Function
cgo	Redirects the user to cqo
cgumbel	Censored Gumbel Distribution
chest.nz	Chest Pain in NZ Adults Data
chinese.nz	Chinese Population in New Zealand 1867-2001 Data
chisq	Chi-squared Distribution
clo	Redirects the user to rrvglm
cloglog	Complementary Log-log Link Function
coalminers	Breathlessness and Wheeze Amongst Coalminers Data
Coef	Computes Model Coefficients and Quantities
Coef.qrrvglm	Returns Important Matrices etc. of a QO Object
Coef.qrrvglm-class	Class "Coef.qrrvglm"
Coef.rrvglm	Returns Important Matrices etc. of a RR-VGLM Object
Coef.rrvglm-class	Class "Coef.rrvglm"
Coef.vlm	Extract Model Coefficients for VLM Objects
CommonVGAMffArguments	Common VGAM family function Arguments
constraints	Constraint Matrices
constraints.vlm	Constraint Matrices
cqo	Fitting Constrained Quadratic Ordination (CQO)
crashbc	Crashes on New Zealand Roads in 2009
crashf	Crashes on New Zealand Roads in 2009
crashi	Crashes on New Zealand Roads in 2009
crashmc	Crashes on New Zealand Roads in 2009
crashp	Crashes on New Zealand Roads in 2009
crashtr	Crashes on New Zealand Roads in 2009
cratio	Ordinal Regression with Continuation Ratios
cumulative	Ordinal Regression with Cumulative Probabilities

-- D --

Dagum	The Dagum Distribution
dagum	Dagum Distribution Family Function
dalap	The Laplace Distribution
damh	Ali-Mikhail-Haq Distribution's Bivariate Distribution
dbenf	Benford's Distribution
dbenini	The Benini Distribution
dbetabinom	The Beta-Binomial Distribution
dbetabinom.ab	The Beta-Binomial Distribution
dbetageom	The Beta-Geometric Distribution
dbetanorm	The Beta-Normal Distribution
dbilogis4	Bivariate Logistic Distribution
dbinom2.or	Bivariate Binary Regression with an Odds Ratio
dbinom2.rho	Bivariate Probit Model
dbisa	The Birnbaum-Saunders Distribution
dbort	The Borel-Tanner Distribution
dcard	Cardioid Distribution
dcennormal1	Univariate Normal Distribution with Double Censoring
ddagum	The Dagum Distribution
deexp	Expectiles of the Exponential Distribution
DeLury	DeLury's Method for Population Size Estimation
denorm	Expectiles of the Normal Distribution
deplot.lmscreg	Density Plot for LMS Quantile Regression
depvar	Response variable extracted
deunif	Expectiles of the Uniform Distribution
dexpbinomial	Double Exponential Binomial Distribution Family Function
dexpgeom	The Exponential Geometric Distribution
dexplog	The Exponential Logarithmic Distribution
dexppois	The Exponential Poisson Distribution
df.residual	Residual Degrees-of-Freedom
df.residual_vlm	Residual Degrees-of-Freedom
dfbeta	Hat Values and Regression Deletion Diagnostics
dfbetavlm	Hat Values and Regression Deletion Diagnostics
dfelix	The Felix Distribution
dfgm	Farlie-Gumbel-Morgenstern's Bivariate Distribution
dfisk	The Fisk Distribution
dfnorm	The Folded-Normal Distribution
dfrank	Frank's Bivariate Distribution
dfrechet	The Frechet Distribution
dgengamma	The Generalized Gamma Distribution
dgenray	The Generalized Rayleigh Distribution
dgev	The Generalized Extreme Value Distribution
dgompertz	The Gompertz Distribution
dgpd	The Generalized Pareto Distribution
dgumbel	The Gumbel Distribution
dgumbelII	The Gumbel-II Distribution
dhuber	Huber's least favourable distribution
dhzeta	Haight's Zeta Function
dinv.gaussian	The Inverse Gaussian Distribution
dinvlomax	The Inverse Lomax Distribution
dinvparalogistic	The Inverse Paralogistic Distribution
dirichlet	Fitting a Dirichlet Distribution
dirmul.old	Fitting a Dirichlet-Multinomial Distribution
dirmultinomial	Fitting a Dirichlet-Multinomial Distribution
dkoenker	Expectiles/Quantiles of the Koenker Distribution
dkumar	The Kumaraswamy Distribution
dlaplace	The Laplace Distribution
dlgamma	The Log-Gamma Distribution
dlind	The Lindley Distribution
dlino	The Generalized Beta Distribution (Libby and Novick, 1982)
dlog	Logarithmic Distribution
dloglap	The Log-Laplace Distribution
dlomax	The Lomax Distribution
dmakeham	The Makeham Distribution
dmaxwell	The Maxwell Distribution
dnaka	Nakagami Distribution
dparalogistic	The Paralogistic Distribution
dpareto	The Pareto Distribution
dparetoI	The Pareto(IV/III/II) Distributions
dparetoII	The Pareto(IV/III/II) Distributions
dparetoIII	The Pareto(IV/III/II) Distributions
dparetoIV	The Pareto(IV/III/II) Distributions
dperks	The Perks Distribution
dplack	Plackett's Bivariate Distribution
dpolono	The Poisson Lognormal Distribution
dposbern	Positive Bernoulli Sequence Model
dposbinom	Positive-Binomial Distribution
dposgeom	Positive-geometric Distribution
dposnegbin	Positive-Negative Binomial Distribution
dposnorm	The Positive-Normal Distribution
dpospois	Positive-Poisson Distribution
drayleigh	The Rayleigh Distribution
drice	The Rice Distribution
dsimplex	Simplex Distribution
dsinmad	The Singh-Maddala Distribution
dskellam	The Skellam Distribution
dslash	Slash Distribution
dsnorm	Skew-Normal Distribution
dtikuv	A Short-tailed Symmetric Distribution
dtobit	The Tobit Distribution
dtpareto	The Truncated Pareto Distribution
dtriangle	The Triangle Distribution
dyules	Yule-Simon Distribution
dzabinom	Zero-Altered Binomial Distribution
dzageom	Zero-Altered Geometric Distribution
dzanegbin	Zero-Altered Negative Binomial Distribution
dzapois	Zero-Altered Poisson Distribution
dzeta	The Zeta Distribution
dzibinom	Zero-Inflated Binomial Distribution
dzigeom	Zero-Inflated Geometric Distribution
dzinegbin	Zero-Inflated Negative Binomial Distribution
dzipf	The Zipf Distribution
dzipois	Zero-Inflated Poisson Distribution

-- E --

edhuber	Huber's least favourable distribution
eexp	Expectiles of the Exponential Distribution
egev	Generalized Extreme Value Distribution Family Function
egumbel	Gumbel Distribution Family Function
elogit	Logit Link Function
enorm	Expectiles of the Normal Distribution
enzyme	Enzyme Data
erf	Error Function
erlang	Erlang Distribution
eunif	Expectiles of the Uniform Distribution
Expectiles-Exponential	Expectiles of the Exponential Distribution
Expectiles-Koenker	Expectiles/Quantiles of the Koenker Distribution
Expectiles-Normal	Expectiles of the Normal Distribution
Expectiles-Uniform	Expectiles of the Uniform Distribution
expexp	Exponentiated Exponential Distribution
expexp1	Exponentiated Exponential Distribution
expgeom	The Exponential Geometric Distribution
expgeometric	Exponential Geometric Distribution Family Function
explink	Exponential Link Function
explog	The Exponential Logarithmic Distribution
explogarithmic	Exponential Logarithmic Distribution Family Function
exponential	Exponential Distribution
exppois	The Exponential Poisson Distribution
exppoisson	Exponential Poisson Distribution Family Function

-- F --

Felix	The Felix Distribution
felix	Felix Distribution Family Function
fff	F Distribution Family Function
Fgm	Farlie-Gumbel-Morgenstern's Bivariate Distribution
fgm	Farlie-Gumbel-Morgenstern's Bivariate Distribution Family Function
fill	Creates a Matrix of Appropriate Dimension
fill1	Creates a Matrix of Appropriate Dimension
finney44	Toxicity trial for insects
fisherz	Fisher's Z Link Function
Fisk	The Fisk Distribution
fisk	Fisk Distribution family function
fitted.values.vlm	Fitted Values of a VLM object
fittedvlm	Fitted Values of a VLM object
Fnorm	The Folded-Normal Distribution
fnormal1	Folded Normal Distribution Family Function
format.SurvS4	Create a Survival Object
Frank	Frank's Bivariate Distribution
frank	Frank's Bivariate Distribution Family Function
Frechet	The Frechet Distribution
frechet2	Frechet Distribution Family Function
freund61	Freund's (1961) Bivariate Extension of the Exponential Distribution
fsqrt	Folded Square Root Link Function

-- G --

G1G2G3	The G1G2G3 Blood Group System
gamma1	1-parameter Gamma Distribution
gamma2	2-parameter Gamma Distribution
gamma2.ab	2-parameter Gamma Distribution
gammahyp	Gamma Hyperbola Bivariate Distribution
garma	GARMA (Generalized Autoregressive Moving-Average) Models
gaussianff	Gaussian (normal) Family Function
genbetaII	Generalized Beta Distribution of the Second Kind
gengamma	Generalized Gamma distribution family function
gengammaUC	The Generalized Gamma Distribution
genpoisson	Generalized Poisson distribution
genray	The Generalized Rayleigh Distribution
genrayleigh	Generalized Rayleigh Distribution Family Function
geometric	Geometric (Truncated and Untruncated) Distributions
get.smart	Retrieve One Component of ".smart.prediction"
get.smart.prediction	Retrieves ".smart.prediction"
gev	Generalized Extreme Value Distribution Family Function
gevUC	The Generalized Extreme Value Distribution
gew	General Electric and Westinghouse Data
golf	Gamma-Ordinal Link Function
Gompertz	The Gompertz Distribution
gompertz	Gompertz Distribution Family Function
gpd	Generalized Pareto Distribution Family Function
gpdUC	The Generalized Pareto Distribution
grain.us	Grain Prices Data in USA
grc	Row-Column Interaction Models including Goodman's RC Association Model
gumbel	Gumbel Distribution Family Function
Gumbel-II	The Gumbel-II Distribution
gumbelIbiv	Gumbel's Type I Bivariate Distribution Family Function
gumbelII	Gumbel-II Distribution Family Function
guplot	Gumbel Plot
guplot.default	Gumbel Plot
guplot.vlm	Gumbel Plot

-- H --

hatplot	Hat Values and Regression Deletion Diagnostics
hatplot.vlm	Hat Values and Regression Deletion Diagnostics
hatvalues	Hat Values and Regression Deletion Diagnostics
hatvaluesvlm	Hat Values and Regression Deletion Diagnostics
hormone	Hormone Assay Data
hspider	Hunting Spider Data
huber1	Huber's least favourable distribution family function
huber2	Huber's least favourable distribution family function
Huggins89.t1	Table 1 of Huggins (1989)
hunua	Hunua Ranges Data
hyperg	Hypergeometric Family Function
hypersecant	Hyperbolic Secant Distribution Family Function
hypersecant.1	Hyperbolic Secant Distribution Family Function
Hzeta	Haight's Zeta Function
hzeta	Haight's Zeta Family Function

-- I --

iam	Index from Array to Matrix
identity	Identity Link Function
Inv.gaussian	The Inverse Gaussian Distribution
inv.gaussianff	Inverse Gaussian Distribution Family Function
invbinomial	Inverse Binomial Distribution Family Function
Invlomax	The Inverse Lomax Distribution
invlomax	Inverse Lomax Distribution Family Function
Invparalogistic	The Inverse Paralogistic Distribution
invparalogistic	Inverse Paralogistic Distribution Family Function
is.na.SurvS4	Create a Survival Object
is.parallel	Parallelism Constraint Matrices
is.parallel.matrix	Parallelism Constraint Matrices
is.parallel.vglm	Parallelism Constraint Matrices
is.smart	Test For a Smart Object
is.SurvS4	Create a Survival Object
is.zero	Zero Constraint Matrices
is.zero.matrix	Zero Constraint Matrices
is.zero.vglm	Zero Constraint Matrices

-- K --

koenker	Koenker's Distribution Family Function
Kumar	The Kumaraswamy Distribution
kumar	Kumaraswamy Distribution Family Function

-- L --

lambertW	The Lambert W function
laplace	Laplace Distribution
latvar	Latent Variables
leipnik	Leipnik Distribution Family Function
lerch	Lerch Phi Function
leukemia	Acute Myelogenous Leukemia Survival Data
levy	Levy Distribution Family Function
lgamma3ff	Log-gamma Distribution Family Function
lgammaff	Log-gamma Distribution Family Function
lgammaUC	The Log-Gamma Distribution
Lindley	The Lindley Distribution
lindley	1-parameter Gamma Distribution
Links	Link functions for VGLM/VGAM/etc. families
Lino	The Generalized Beta Distribution (Libby and Novick, 1982)
lino	Generalized Beta Distribution Family Function
lirat	Low-iron Rat Teratology Data
lms.bcg	LMS Quantile Regression with a Box-Cox transformation to a Gamma Distribution
lms.bcn	LMS Quantile Regression with a Box-Cox Transformation to Normality
lms.yjn	LMS Quantile Regression with a Yeo-Johnson Transformation to Normality
lms.yjn2	LMS Quantile Regression with a Yeo-Johnson Transformation to Normality
Log	Logarithmic Distribution
logc	Complementary-log Link Function
loge	Log link function
logff	Logarithmic Distribution
logistic	Logistic Distribution Family Function
logistic1	Logistic Distribution Family Function
logistic2	Logistic Distribution Family Function
logit	Logit Link Function
logitlaplace1	Log-Laplace and Logit-Laplace Distribution Family Functions
loglaplace1	Log-Laplace and Logit-Laplace Distribution Family Functions
loglinb2	Loglinear Model for Two Binary Responses
loglinb3	Loglinear Model for Three Binary Responses
loglog	Log-log Link Function
lognormal	Lognormal Distribution
lognormal3	Lognormal Distribution
logoff	Log link function with an offset
Lomax	The Lomax Distribution
lomax	Lomax Distribution Family Function
lqnorm	Minimizing the L-q norm Family Function
lrtest	Likelihood Ratio Test of Nested Models
lrtest_vglm	Likelihood Ratio Test of Nested Models
lv	Latent Variables
lvplot	Latent Variable Plot
lvplot.qrrvglm	Latent Variable Plot for QO models
lvplot.rrvglm	Latent Variable Plot for RR-VGLMs

-- M --

Makeham	The Makeham Distribution
makeham	Makeham Distribution Family Function
margeff	Marginal effects for the multinomial logit and cumulative models
marital.nz	New Zealand Marital Data.
Math.SurvS4	Create a Survival Object
Max	Maxima
Maxwell	The Maxwell Distribution
maxwell	Maxwell Distribution Family Function
mbinomial	The Matched Binomial Distribution Family Function
mccullagh89	McCullagh (1989) Distribution Family Function
meplot	Mean Excess Plot
meplot.default	Mean Excess Plot
meplot.vlm	Mean Excess Plot
micmen	Michaelis-Menten Model
mix2exp	Mixture of Two Exponential Distributions
mix2normal1	Mixture of Two Univariate Normal Distributions
mix2poisson	Mixture of Two Poisson Distributions
mlogit	Multinomial Logit Link Function
MNSs	The MNSs Blood Group System
model.framevlm	Construct the Model Frame of a VLM Object
model.matrixvlm	Construct the Design Matrix of a VLM Object
moffset	Matrix Offset
morgenstern	Morgenstern's Bivariate Distribution Family Function
multinomial	Multinomial Logit Model

-- N --

Nakagami	Nakagami Distribution
nakagami	Nakagami Distribution Family Function
nbcanlink	Negative binomial canonical link function
nbolf	Negative Binomial-Ordinal Link Function
negbinomial	Negative Binomial Distribution Family Function
negbinomial.size	Negative Binomial Distribution Family Function With Known Size
nidentity	Identity Link Function
nloge	Log link function
normal1	Univariate Normal Distribution
nreciprocal	Reciprocal link function

-- O --

olym08	2008 and 2012 Summer Olympic Final Medal Count Data
olym12	2008 and 2012 Summer Olympic Final Medal Count Data
Ops.SurvS4	Create a Survival Object
Opt	Maxima
ordpoisson	Ordinal Poisson Family Function
oxtemp	Oxford Temperature Data

-- P --

palap	The Laplace Distribution
pamh	Ali-Mikhail-Haq Distribution's Bivariate Distribution
Paralogistic	The Paralogistic Distribution
paralogistic	Paralogistic Distribution Family Function
Pareto	The Pareto Distribution
pareto1	Pareto and Truncated Pareto Distribution Family Functions
ParetoI	The Pareto(IV/III/II) Distributions
ParetoII	The Pareto(IV/III/II) Distributions
paretoII	Pareto(IV/III/II) Distribution Family Functions
ParetoIII	The Pareto(IV/III/II) Distributions
paretoIII	Pareto(IV/III/II) Distribution Family Functions
ParetoIV	The Pareto(IV/III/II) Distributions
paretoIV	Pareto(IV/III/II) Distribution Family Functions
pbenf	Benford's Distribution
pbenini	The Benini Distribution
pbetabinom	The Beta-Binomial Distribution
pbetabinom.ab	The Beta-Binomial Distribution
pbetageom	The Beta-Geometric Distribution
pbetanorm	The Beta-Normal Distribution
pbilogis4	Bivariate Logistic Distribution
pbisa	The Birnbaum-Saunders Distribution
pcard	Cardioid Distribution
pdagum	The Dagum Distribution
peexp	Expectiles of the Exponential Distribution
penorm	Expectiles of the Normal Distribution
Perks	The Perks Distribution
perks	Perks Distribution Family Function
Perom	Captures of peromyscus maniculatus
perspqrrvglm	Perspective plot for QRR-VGLMs
peunif	Expectiles of the Uniform Distribution
pexpgeom	The Exponential Geometric Distribution
pexplog	The Exponential Logarithmic Distribution
pexppois	The Exponential Poisson Distribution
pfgm	Farlie-Gumbel-Morgenstern's Bivariate Distribution
pfisk	The Fisk Distribution
pfnorm	The Folded-Normal Distribution
pfrank	Frank's Bivariate Distribution
pfrechet	The Frechet Distribution
pgamma.deriv	Derivatives of the Incomplete Gamma Integral
pgamma.deriv.unscaled	Derivatives of the Incomplete Gamma Integral (Unscaled Version)
pgengamma	The Generalized Gamma Distribution
pgenray	The Generalized Rayleigh Distribution
pgev	The Generalized Extreme Value Distribution
pgompertz	The Gompertz Distribution
pgpd	The Generalized Pareto Distribution
pgumbel	The Gumbel Distribution
pgumbelII	The Gumbel-II Distribution
phuber	Huber's least favourable distribution
phzeta	Haight's Zeta Function
pinv.gaussian	The Inverse Gaussian Distribution
pinvlomax	The Inverse Lomax Distribution
pinvparalogistic	The Inverse Paralogistic Distribution
pkoenker	Expectiles/Quantiles of the Koenker Distribution
pkumar	The Kumaraswamy Distribution
Plackett	Plackett's Bivariate Distribution
plackett	Plackett's Bivariate Distribution Family Function
plaplace	The Laplace Distribution
plgamma	The Log-Gamma Distribution
plind	The Lindley Distribution
plino	The Generalized Beta Distribution (Libby and Novick, 1982)
plog	Logarithmic Distribution
ploglap	The Log-Laplace Distribution
plomax	The Lomax Distribution
plotdeplot.lmscreg	Density Plot for LMS Quantile Regression
plotqrrvglm	Model Diagnostic Plots for QRR-VGLMs
plotqtplot.lmscreg	Quantile Plot for LMS Quantile Regression
plotrcim0	Main effects plot for a Row-Column Interaction Model (RCIM)
plotvgam	Default VGAM Plotting
plotvgam.control	Control Function for plotvgam()
pmakeham	The Makeham Distribution
pmaxwell	The Maxwell Distribution
pnaka	Nakagami Distribution
pneumo	Pneumoconiosis in Coalminers Data
pnorm2	Bivariate normal distribution cumulative distribution function
poissonff	Poisson Family Function
poissonp	Poisson-points-on-a-plane/volume Distances Distribution
polf	Poisson-Ordinal Link Function
Polono	The Poisson Lognormal Distribution
polya	Negative Binomial Distribution Family Function
posbernoulli.b	Positive Bernoulli Family Function with Behavioural Effects
posbernoulli.t	Positive Bernoulli Family Function with Time Effects
posbernoulli.tb	Positive Bernoulli Family Function with Time and Behavioural Effects (experimental)
posbernUC	Positive Bernoulli Sequence Model
Posbinom	Positive-Binomial Distribution
posbinomial	Positive Binomial Distribution Family Function
Posgeom	Positive-geometric Distribution
Posnegbin	Positive-Negative Binomial Distribution
posnegbinomial	Positive Negative Binomial Distribution Family Function
Posnorm	The Positive-Normal Distribution
posnormal1	Positive Normal Distribution Family Function
Pospois	Positive-Poisson Distribution
pospoisson	Positive Poisson Distribution Family Function
powl	Power Link Function
pparalogistic	The Paralogistic Distribution
ppareto	The Pareto Distribution
pparetoI	The Pareto(IV/III/II) Distributions
pparetoII	The Pareto(IV/III/II) Distributions
pparetoIII	The Pareto(IV/III/II) Distributions
pparetoIV	The Pareto(IV/III/II) Distributions
pperks	The Perks Distribution
pplack	Plackett's Bivariate Distribution
ppolono	The Poisson Lognormal Distribution
pposbinom	Positive-Binomial Distribution
pposgeom	Positive-geometric Distribution
pposnegbin	Positive-Negative Binomial Distribution
pposnorm	The Positive-Normal Distribution
ppospois	Positive-Poisson Distribution
prayleigh	The Rayleigh Distribution
predictqrrvglm	Predict Method for a CQO fit
predictvglm	Predict Method for a VGLM fit
prentice74	Prentice (1974) Log-gamma Distribution
probit	Probit Link Function
propodds	Proportional Odds Model for Ordinal Regression
prplot	Probability Plots for Categorical Data Analysis
prplot.control	Probability Plots for Categorical Data Analysis
psimplex	Simplex Distribution
psinmad	The Singh-Maddala Distribution
pslash	Slash Distribution
ptikuv	A Short-tailed Symmetric Distribution
ptobit	The Tobit Distribution
ptpareto	The Truncated Pareto Distribution
ptriangle	The Triangle Distribution
put.smart	Adds a List to the End of the List ".smart.prediction"
pyules	Yule-Simon Distribution
pzabinom	Zero-Altered Binomial Distribution
pzageom	Zero-Altered Geometric Distribution
pzanegbin	Zero-Altered Negative Binomial Distribution
pzapois	Zero-Altered Poisson Distribution
pzibinom	Zero-Inflated Binomial Distribution
pzigeom	Zero-Inflated Geometric Distribution
pzinegbin	Zero-Inflated Negative Binomial Distribution
pzipf	The Zipf Distribution
pzipois	Zero-Inflated Poisson Distribution

-- Q --

qalap	The Laplace Distribution
qbenf	Benford's Distribution
qbenini	The Benini Distribution
qbetanorm	The Beta-Normal Distribution
qbisa	The Birnbaum-Saunders Distribution
qcard	Cardioid Distribution
qdagum	The Dagum Distribution
qeexp	Expectiles of the Exponential Distribution
qenorm	Expectiles of the Normal Distribution
qeunif	Expectiles of the Uniform Distribution
qexpgeom	The Exponential Geometric Distribution
qexplog	The Exponential Logarithmic Distribution
qexppois	The Exponential Poisson Distribution
qfisk	The Fisk Distribution
qfnorm	The Folded-Normal Distribution
qfrechet	The Frechet Distribution
qgengamma	The Generalized Gamma Distribution
qgenray	The Generalized Rayleigh Distribution
qgev	The Generalized Extreme Value Distribution
qgompertz	The Gompertz Distribution
qgpd	The Generalized Pareto Distribution
qgumbel	The Gumbel Distribution
qgumbelII	The Gumbel-II Distribution
qhuber	Huber's least favourable distribution
qhzeta	Haight's Zeta Function
qinvlomax	The Inverse Lomax Distribution
qinvparalogistic	The Inverse Paralogistic Distribution
qkoenker	Expectiles/Quantiles of the Koenker Distribution
qkumar	The Kumaraswamy Distribution
qlaplace	The Laplace Distribution
qlgamma	The Log-Gamma Distribution
qlino	The Generalized Beta Distribution (Libby and Novick, 1982)
qloglap	The Log-Laplace Distribution
qlomax	The Lomax Distribution
qmakeham	The Makeham Distribution
qmaxwell	The Maxwell Distribution
qnaka	Nakagami Distribution
qparalogistic	The Paralogistic Distribution
qpareto	The Pareto Distribution
qparetoI	The Pareto(IV/III/II) Distributions
qparetoII	The Pareto(IV/III/II) Distributions
qparetoIII	The Pareto(IV/III/II) Distributions
qparetoIV	The Pareto(IV/III/II) Distributions
qperks	The Perks Distribution
qposbinom	Positive-Binomial Distribution
qposgeom	Positive-geometric Distribution
qposnegbin	Positive-Negative Binomial Distribution
qposnorm	The Positive-Normal Distribution
qpospois	Positive-Poisson Distribution
qrayleigh	The Rayleigh Distribution
qrrvglm.control	Control function for QRR-VGLMs (CQO)
qsimplex	Simplex Distribution
qsinmad	The Singh-Maddala Distribution
qtikuv	A Short-tailed Symmetric Distribution
qtobit	The Tobit Distribution
qtpareto	The Truncated Pareto Distribution
qtplot.egumbel	Quantile Plot for Gumbel Regression
qtplot.gumbel	Quantile Plot for Gumbel Regression
qtplot.lmscreg	Quantile Plot for LMS Quantile Regression
qtriangle	The Triangle Distribution
quasibinomialff	Quasi-Binomial Family Function
quasipoissonff	Quasi-Poisson Family Function
Qvar	Quasi-variances Preprocessing Function
qzabinom	Zero-Altered Binomial Distribution
qzageom	Zero-Altered Geometric Distribution
qzanegbin	Zero-Altered Negative Binomial Distribution
qzapois	Zero-Altered Poisson Distribution
qzibinom	Zero-Inflated Binomial Distribution
qzigeom	Zero-Inflated Geometric Distribution
qzinegbin	Zero-Inflated Negative Binomial Distribution
qzipois	Zero-Inflated Poisson Distribution

-- R --

ralap	The Laplace Distribution
ramh	Ali-Mikhail-Haq Distribution's Bivariate Distribution
Rayleigh	The Rayleigh Distribution
rayleigh	Rayleigh Distribution Family Function
rbenf	Benford's Distribution
rbenini	The Benini Distribution
rbetabinom	The Beta-Binomial Distribution
rbetabinom.ab	The Beta-Binomial Distribution
rbetageom	The Beta-Geometric Distribution
rbetanorm	The Beta-Normal Distribution
rbilogis4	Bivariate Logistic Distribution
rbinom2.or	Bivariate Binary Regression with an Odds Ratio
rbinom2.rho	Bivariate Probit Model
rbisa	The Birnbaum-Saunders Distribution
rbort	The Borel-Tanner Distribution
rcard	Cardioid Distribution
Rcim	Mark the Baseline of Row and Column on a Matrix data
rcim	Row-Column Interaction Models including Goodman's RC Association Model
rcqo	Constrained Quadratic Ordination
rdagum	The Dagum Distribution
rdiric	The Dirichlet distribution
recexp1	Upper Record Values from a 1-parameter Exponential Distribution
reciprocal	Reciprocal link function
recnormal1	Upper Record Values from a Univariate Normal Distribution
reexp	Expectiles of the Exponential Distribution
renorm	Expectiles of the Normal Distribution
reunif	Expectiles of the Uniform Distribution
rexpgeom	The Exponential Geometric Distribution
rexplog	The Exponential Logarithmic Distribution
rexppois	The Exponential Poisson Distribution
rfgm	Farlie-Gumbel-Morgenstern's Bivariate Distribution
rfisk	The Fisk Distribution
rfnorm	The Folded-Normal Distribution
rfrank	Frank's Bivariate Distribution
rfrechet	The Frechet Distribution
rgengamma	The Generalized Gamma Distribution
rgenray	The Generalized Rayleigh Distribution
rgev	The Generalized Extreme Value Distribution
rgompertz	The Gompertz Distribution
rgpd	The Generalized Pareto Distribution
rgumbel	The Gumbel Distribution
rgumbelII	The Gumbel-II Distribution
rhobit	Rhobit Link Function
rhuber	Huber's least favourable distribution
rhzeta	Haight's Zeta Function
Rice	The Rice Distribution
riceff	Rice Distribution Family Function
rig	Reciprocal Inverse Gaussian distribution
rinv.gaussian	The Inverse Gaussian Distribution
rinvlomax	The Inverse Lomax Distribution
rinvparalogistic	The Inverse Paralogistic Distribution
rkoenker	Expectiles/Quantiles of the Koenker Distribution
rkumar	The Kumaraswamy Distribution
rlaplace	The Laplace Distribution
rlgamma	The Log-Gamma Distribution
rlind	The Lindley Distribution
rlino	The Generalized Beta Distribution (Libby and Novick, 1982)
rlog	Logarithmic Distribution
rloglap	The Log-Laplace Distribution
rlomax	The Lomax Distribution
rlplot.egev	Return Level Plot for GEV Fits
rlplot.gev	Return Level Plot for GEV Fits
rmakeham	The Makeham Distribution
rmaxwell	The Maxwell Distribution
rnaka	Nakagami Distribution
rparalogistic	The Paralogistic Distribution
rpareto	The Pareto Distribution
rparetoI	The Pareto(IV/III/II) Distributions
rparetoII	The Pareto(IV/III/II) Distributions
rparetoIII	The Pareto(IV/III/II) Distributions
rparetoIV	The Pareto(IV/III/II) Distributions
rperks	The Perks Distribution
rplack	Plackett's Bivariate Distribution
rpolono	The Poisson Lognormal Distribution
rposbern	Positive Bernoulli Sequence Model
rposbinom	Positive-Binomial Distribution
rposgeom	Positive-geometric Distribution
rposnegbin	Positive-Negative Binomial Distribution
rposnorm	The Positive-Normal Distribution
rpospois	Positive-Poisson Distribution
rrar	Nested reduced-rank autoregressive models for multiple time series
rrayleigh	The Rayleigh Distribution
rrice	The Rice Distribution
rrvglm	Fitting Reduced-Rank Vector Generalized Linear Models (RR-VGLMs)
rrvglm-class	Class "rrvglm"
rrvglm.control	Control function for rrvglm
rrvglm.optim.control	Control function for rrvglm() calling optim()
rsimplex	Simplex Distribution
rsinmad	The Singh-Maddala Distribution
rskellam	The Skellam Distribution
rslash	Slash Distribution
rsnorm	Skew-Normal Distribution
rtikuv	A Short-tailed Symmetric Distribution
rtobit	The Tobit Distribution
rtpareto	The Truncated Pareto Distribution
rtriangle	The Triangle Distribution
ruge	Rutherford-Geiger Polonium Data
ryules	Yule-Simon Distribution
rzabinom	Zero-Altered Binomial Distribution
rzageom	Zero-Altered Geometric Distribution
rzanegbin	Zero-Altered Negative Binomial Distribution
rzapois	Zero-Altered Poisson Distribution
rzibinom	Zero-Inflated Binomial Distribution
rzigeom	Zero-Inflated Geometric Distribution
rzinegbin	Zero-Inflated Negative Binomial Distribution
rzipois	Zero-Inflated Poisson Distribution

-- S --

s	Defining smooths in VGAM formulae
seq2binomial	The Two-stage Sequential Binomial Distribution Family Function
setup.smart	Smart Prediction Setup
show-method	Class "SurvS4"
show.SurvS4	Create a Survival Object
simplex	Simplex Distribution Family Function
Sinmad	The Singh-Maddala Distribution
sinmad	Singh-Maddala Distribution Family Function
Skellam	The Skellam Distribution
skellam	Skellam Distribution Family Function
skewnormal1	Univariate Skew-Normal Distribution Family Function
Slash	Slash Distribution
slash	Slash Distribution Family Function
smart.expression	S Expression for Smart Functions
smart.mode.is	Determine What Mode the Smart Prediction is In
smartpred	Smart Prediction
snorm	Skew-Normal Distribution
sratio	Ordinal Regression with Stopping Ratios
studentt	Student t Distribution
studentt2	Student t Distribution
studentt3	Student t Distribution
Summary.SurvS4	Create a Survival Object
SUR	Seemingly Unrelated Regressions
SurvS4	Create a Survival Object
SurvS4-class	Class "SurvS4"

-- T --

Tikuv	A Short-tailed Symmetric Distribution
tikuv	Short-tailed Symmetric Distribution Family Function
Tobit	The Tobit Distribution
tobit	Tobit Model
Tol	Tolerances
toxop	Toxoplasmosis Data
Tpareto	The Truncated Pareto Distribution
tpareto1	Pareto and Truncated Pareto Distribution Family Functions
Triangle	The Triangle Distribution
triangle	Triangle Distribution Family Function
trplot	Trajectory Plot
trplot.qrrvglm	Trajectory plot for QRR-VGLMs
truncgeometric	Geometric (Truncated and Untruncated) Distributions
truncweibull	Truncated Weibull Distribution Family Function
TypicalVGAMfamilyFunction	Common VGAM family function Arguments
TypicalVGAMlinkFunction	Link functions for VGLM/VGAM/etc. families

-- U --

ucberk	University California Berkeley Graduate Admissions
uqo	Fitting Unconstrained Quadratic Ordination (UQO)
uqo.control	Control Function for UQO models

-- V --

venice	Venice Maximum Sea Levels Data
venice90	Venice Maximum Sea Levels Data
VGAM	Vector Generalized Linear and Additive Models
vgam	Fitting Vector Generalized Additive Models
vgam-class	Class "vgam"
vgam.control	Control function for vgam
vglm	Fitting Vector Generalized Linear Models
vglm-class	Class "vglm"
vglm.control	Control function for vglm
vglmff-class	Class "vglmff"
vonmises	von Mises Distribution Family Function
vsmooth.spline	Vector cubic smoothing spline

-- W --

waitakere	Waitakere Ranges Data
wald	Wald Distribution Family Function
weibull	Weibull Distribution Family Function
weightsvglm	Prior and Working Weights of a VGLM fit
wffc	2008 World Fly Fishing Championships Data
wffc.indiv	2008 World Fly Fishing Championships (Individual results) Data
wffc.nc	2008 World Fly Fishing Championships (Number of captures) Data
wffc.P1	Point System for the 2008 World Fly Fishing Championships
wffc.P1star	Point System for the 2008 World Fly Fishing Championships
wffc.P2	Point System for the 2008 World Fly Fishing Championships
wffc.P2star	Point System for the 2008 World Fly Fishing Championships
wffc.P3	Point System for the 2008 World Fly Fishing Championships
wffc.P3star	Point System for the 2008 World Fly Fishing Championships
wffc.teams	2008 World Fly Fishing Championships (Team results) Data
wrapup.smart	Cleans Up After Smart Prediction

-- Y --

yeo.johnson	Yeo-Johnson Transformation
yip88	Zero-Inflated Poisson Distribution (Yip (1988) algorithm)
Yules	Yule-Simon Distribution
yulesimon	Yule-Simon Family Function

-- Z --

Zabinom	Zero-Altered Binomial Distribution
zabinomial	Zero-Altered Binomial Distribution
Zageom	Zero-Altered Geometric Distribution
zageometric	Zero-Altered Geometric Distribution
Zanegbin	Zero-Altered Negative Binomial Distribution
zanegbinomial	Zero-Altered Negative Binomial Distribution
Zapois	Zero-Altered Poisson Distribution
zapoisson	Zero-Altered Poisson Distribution
zero	The zero Argument in VGAM Family Functions
Zeta	The Zeta Distribution
zeta	Riemann's Zeta Function
zetaff	Zeta Distribution Family Function
Zibinom	Zero-Inflated Binomial Distribution
zibinomial	Zero-Inflated Binomial Distribution Family Function
Zigeom	Zero-Inflated Geometric Distribution
zigeometric	Zero-Inflated Geometric Distribution Family Function
Zinegbin	Zero-Inflated Negative Binomial Distribution
zinegbinomial	Zero-Inflated Negative Binomial Distribution Family Function
zipebcom	Exchangeable bivariate cloglog odds-ratio model from a zero-inflated Poisson distribution
Zipf	The Zipf Distribution
zipf	Zipf Distribution Family Function
Zipois	Zero-Inflated Poisson Distribution
zipoisson	Zero-Inflated Poisson Distribution Family Function
zipoissonff	Zero-Inflated Poisson Distribution Family Function

-- misc --

[.SurvS4

Create a Survival Object